parente train [options] <train.hap> <markers.map> <train-out-prefix> parente infer [options] <train-out-prefix> <cohort.geno> <threshold> <out-prefix>
The example data is a small portion of the data from HapMap3. View the README inside to explain what each file is.
To run using the default parameters:
parente train train.hap markers.map train-output parente infer train-output cohort.geno 0 infer-output